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From: y1011@stu.kanazawa-u.ac.jp
Subject: emchain does not run normally
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Date: Fri, 24 Nov 2017 04:49:48 GMT
From: y1011@stu.kanazawa-u.ac.jp
To: xmmhelp@sciops.esa.int
CC: y1011@stu.kanazawa-u.ac.jp
Subject: emchain does not run normally 
Full_Name: Yu Kai
Submission from: (NULL) (133.28.47.161)


Dear helpdesk,

Environment : xmmsas_20170719_1539-16.1.0
                        Ubuntu16.04 64
                        Perl v5.22.4

when running emchian on any OBSID, I get the following error message :
(however, epchain runs normally)

** embadpixfind: warning (getCalBadpix10),  Bright pixel at         383        
311  is declared uplinked in the CCF but is present in the data.
** embadpixfind: warning (getCalBadpix10),  Bright pixel at         383        
318  is declared uplinked in the CCF but is present in the data.
** embadpixfind: warning (getCalBadpix10),  Bright pixel at         580        
394  is declared uplinked in the CCF but is present in the data.
** embadpixfind: warning (getCalBadpix10),  Bright pixel at         594         
58  is declared uplinked in the CCF but is present in the data.
** embadpixfind: warning (getCalBadpix10),  Bright pixel at         594        
389  is declared uplinked in the CCF but is present in the data.
** embadpixfind: warning (getCalBadpix10),  Bright pixel at         271        
187  is declared uplinked in the CCF but is present in the data.
** evselect: warning (NoProductExp), No live time information available.  Cannot
write EXPOSURE keyword for output products.
** evselect: warning (NoProductExp), No live time information available.  Cannot
write EXPOSURE keyword for output products.
Segmentation fault
 : Number of rows in colfile doesn't match rows in input file.
** dsrename: error (columnNotFound), Could not find column with qualified name
P0108260201M2S002FBKTSR0000.FIT:RATE:RATE1 in table RATE in dataset
P0108260201M2S002FBKTSR0000.FIT
fcalc3.7 : Error parsing expression
fcalc3.7 : Error Status Returned :  202
fcalc3.7 : keyword not found in header

fcalc3.7 :  ***** FITSIO Error Stack Dump *****
ffgcnn could not find column: FRACEXP
ffgkey could not find keyword: FRACEXP
fcalc3.7 : Unable to open infile
fcalc3.7 : Error Status Returned :  104
fcalc3.7 : could not open the named file

fcalc3.7 :  ***** FITSIO Error Stack Dump *****
failed to find or open the following file: (ffopen)
toto.in.mos
mv: cannot stat 'toto.out.mos': No such file or directory
fcolpar v1.2 : unable to open the FITS file
fcolpar v1.2 : Error Status Returned :  104
fcolpar v1.2 : could not open the named file

fcolpar v1.2 :  ***** FITSIO Error Stack Dump *****
failed to find or open the following file: (ffopen)
toto.in.mos[1]
fparkey4.3 : unable to open the FITS file toto.in.mos[1]
fparkey4.3 : Error Status Returned :  104
fparkey4.3 : could not open the named file

fparkey4.3 :  ***** FITSIO Error Stack Dump *****
failed to find or open the following file: (ffopen)
toto.in.mos[1]
fcalc3.7 : Unable to open infile
fcalc3.7 : Error Status Returned :  104
fcalc3.7 : could not open the named file

fcalc3.7 :  ***** FITSIO Error Stack Dump *****
failed to find or open the following file: (ffopen)
toto.in.mos
mv: cannot stat 'toto.out.mos': No such file or directory
fcolpar v1.2 : unable to open the FITS file
fcolpar v1.2 : Error Status Returned :  104
fcolpar v1.2 : could not open the named file

fcolpar v1.2 :  ***** FITSIO Error Stack Dump *****
failed to find or open the following file: (ffopen)
toto.in.mos[1]
fparkey4.3 : unable to open the FITS file toto.in.mos[1]
fparkey4.3 : Error Status Returned :  104
fparkey4.3 : could not open the named file

fparkey4.3 :  ***** FITSIO Error Stack Dump *****
failed to find or open the following file: (ffopen)
toto.in.mos[1]
fcalc3.7 : Unable to open infile
fcalc3.7 : Error Status Returned :  104
fcalc3.7 : could not open the named file

fcalc3.7 :  ***** FITSIO Error Stack Dump *****
failed to find or open the following file: (ffopen)
toto.in.mos
** embadpixfind: warning (getCalBadpix10),  Bright pixel at         383        
311  is declared uplinked in the CCF but is present in the data.
** embadpixfind: warning (getCalBadpix10),  Bright pixel at         383        
318  is declared uplinked in the CCF but is present in the data.
** embadpixfind: warning (getCalBadpix10),  Bright pixel at         580        
394  is declared uplinked in the CCF but is present in the data.
** evselect: warning (NoCCDcolumn), Event list does not have a CCDNR column.
Cannot update exposure information. 
** embadpixfind: warning (getCalBadpix10),  Bright pixel at         383        
311  is declared uplinked in the CCF but is present in the data.
** embadpixfind: warning (getCalBadpix10),  Bright pixel at         383        
318  is declared uplinked in the CCF but is present in the data.
** embadpixfind: warning (getCalBadpix10),  Bright pixel at         580        
394  is declared uplinked in the CCF but is present in the data.
** evselect: warning (NoCCDcolumn), Event list does not have a CCDNR column.
Cannot update exposure information. 
** evselect: warning (NoCCDcolumn), Event list does not have a CCDNR column.
Cannot update exposure information. 
** evselect: warning (NoCCDcolumn), Event l

Message of length 25885 truncated

Reply 1

Resend
From: Jacobo Ebrero <xmmhelp@sciops.esa.int>
To: y1011@stu.kanazawa-u.ac.jp
Subject: Re: emchain does not run normally (PR#82623)
Date: Mon Nov 27 13:42:09 2017
Dear Yu Kai,

We have run emchain with no errors for the ObsID of your particular example
(0108260201). We have executed it under Ubuntu 16.04 LTS, x86_64 with SAS
16.1.0, perl 5.24.1 and Heasoft 6.21.

In order to try to understand what is your problem we would need to know the
output of "sasversion" and the output of "env" (after Heasoft and SAS
initialization). One important thing is what is the perl version that you
declared in your SAS installation in SAS_PERL, and the perl version you used in
when you build Heasoft. If perl versions differ this could be the reason of your
error messages.

Best regards,
Jacobo
----------------------
Dr. Jacobo Ebrero
XMM-Newton SOC
User Support Group

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